Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015854940.1_cds_XP_016512709.1_25324
CDS Infomation

[gene=LOC107829754] [db_xref=GeneID:107829754] [protein=1-aminocyclopropane-1-carboxylate synthase 3-like] [protein_id=XP_016512709.1] [location=complement(join(28167..29136,29427..29587,29985..30116,30970..31143))] [gbkey=CDS]
Sequence

ATGGATAGTGATAGGAGGGATTGCCACTTGAACATGTTGTCCAAAATGGCTATGTGCAAA
TCACACGGGCAAGACTCTTCCTATTTCATAGGATGGCAAGAATATGAGAAGAACCCTTAT
CATCCCATTCAAAATCCTTCTGGTATTATTCAGATGGGTCTTGCTGAGAATCAGCTCTCA
TTCGATCTTCTTGAATCATGGCTCACAAGAAACCAAGATGTAATCCAGTTTAGAGAAAAT
GGAGGATCTATGTTCAGAGACTTGGCTCTTTTCCAAGATTATCATGGATTGCAGGCTTTC
AAGAACGTACTAGTGTCATTCATGGGTGAGATCAGAAGAAGGAAAGTAAAATTTGATCCA
GAGAAGCTAGTACTCACAGCTGGTTCAACTTCAGCAAACGAAACCCTCATATTTTGCTTA
GCTGAACCTGGAGAAGCTCTCCTTCTTCCAACTCCTTATTATCCAGGGTTTGATAGAGAT
CTAAAATGGAGAACAGGGGCTGAAATTGTACCCATACACTGCTACAGTTCAAATAACTTC
AGAATAACTGAGTCTGCCCTTGAAGATGCATATGAAGAAGCCCAACGACTTAATTTAAGA
GTCAAGGGTGTATTTATCACAAATCCTTCAAATCCACTAGGGACAACCATGTCACGAGAC
GAATTAAACAATCTTATCACCTTTGCCATGGCCAAAAATATTCATATAGTTAGCGACGAA
ATATACGCTGGAACAGTTTTCGATTCGCCAAAATTCATAAGCATAATGGAAGCTTTAATT
GACAGAAAACATGAAAAATCCAAAATGTGGAGTCAAGTTCACATTGTGTCAAGTCTATCA
AAAGATCTAGGTCTACCAGGTTTCAGAATTGGGATGATTTATTCAAACAATGAAACTCTT
ATAGCTGCTGCTACAAAAATGTCAAGTTTTGGACTCATTTCATCTCAAACTCAGTATCTA
CTATCTAAAATTCTTGGAGATAAAAAATTTATAAAACGTTACATTAAAGAAAACAAGAAA
GGATTGAAAAAGAGGAGGGAAATGCTTGTTTCCGGGTTAGAGAATAGTGGGATTGAGTGT
TTGAAAAGTAATGCTGGATTATTTTGTTTTGTGGACATGAGGCATTTGCTAAATTCAAAC
ACATTTGAAGCAGAAATGGAACTGTGGAGAAAAATACTACTAAGTGATGTTGGTTTAAAT
GTGTCTCCTGGATCTTCTTGTCACTGTAGTGAACCTGGTTGGTTTAAAATTTGTTTTGCA
AATATTGCCGAAGAAACTCTTGATCTCGCGATGCAGAGGATTAATGATTTTGTCAGTTCT
ATGAATCTTCAACGGCGACAGCTGATCGCGGCGGCGTCGGCGTCTAGCTCAAGGAGGAGG
ACACTTGCGAACTGGGTTGTTAAGTTATCTTCAGGTGAAGGAAAAACATATCGTTGA

Peptide Sequence

PEP ID

XP_016512709.1
PEP Infomation

PREDICTED: 1-aminocyclopropane-1-carboxylate synthase 3-like [Nicotiana tabacum]
Sequence

MDSDRRDCHLNMLSKMAMCKSHGQDSSYFIGWQEYEKNPYHPIQNPSGIIQMGLAENQLS
FDLLESWLTRNQDVIQFRENGGSMFRDLALFQDYHGLQAFKNVLVSFMGEIRRRKVKFDP
EKLVLTAGSTSANETLIFCLAEPGEALLLPTPYYPGFDRDLKWRTGAEIVPIHCYSSNNF
RITESALEDAYEEAQRLNLRVKGVFITNPSNPLGTTMSRDELNNLITFAMAKNIHIVSDE
IYAGTVFDSPKFISIMEALIDRKHEKSKMWSQVHIVSSLSKDLGLPGFRIGMIYSNNETL
IAAATKMSSFGLISSQTQYLLSKILGDKKFIKRYIKENKKGLKKRREMLVSGLENSGIEC
LKSNAGLFCFVDMRHLLNSNTFEAEMELWRKILLSDVGLNVSPGSSCHCSEPGWFKICFA
NIAEETLDLAMQRINDFVSSMNLQRRQLIAAASASSSRRRTLANWVVKLSSGEGKTYR

Transcript Sequence

Gene sequence data has not been registered.